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1

Rate of sequence divergence under constant selection

Alexey S Kondrashov, Inna S Povolotskaya, Dmitry N Ivankov, Fyodor A Kondrashov

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 602 KB

english, 2010

2

Data-driven non-Markovian closure models

Kondrashov, Dmitri, Chekroun, Mickaël D., Ghil, Michael

Journal:

Physica D: Nonlinear Phenomena

Année:

2015

Langue:

english

Fichier:

PDF, 2.20 MB

english, 2015

3

Signatures of Nonlinear Dynamics in an Idealized Atmospheric Model

Kondrashov, Dmitri, Kravtsov, Sergey, Ghil, Michael

Journal:

Journal of the Atmospheric Sciences

Année:

2011

Langue:

english

Fichier:

PDF, 1.30 MB

english, 2011

4

Predicting stochastic systems by noise sampling, and application to the El Niño-Southern Oscillation

Mickaël David Chekroun, Dmitri Kondrashov and Michael Ghil

Journal:

Proceedings of the National Academy of Sciences

Année:

2011

Langue:

english

Fichier:

PDF, 1.38 MB

english, 2011

5

Data-adaptive harmonic spectra and multilayer Stuart-Landau models

Chekroun, Mickaël D., Kondrashov, Dmitri

Journal:

Chaos An Interdisciplinary Journal of Nonlinear Science

Année:

2017

Langue:

english

Fichier:

PDF, 15.72 MB

english, 2017

6

Data-adaptive harmonic analysis and modeling of solar wind-magnetosphere coupling

Kondrashov, Dmitri, Chekroun, Mickaël D.

Journal:

Journal of Atmospheric and Solar-Terrestrial Physics

Année:

2018

Langue:

english

Fichier:

PDF, 3.35 MB

english, 2018

7

Data-adaptive harmonic decomposition and prediction of Arctic sea ice extent

Kondrashov, Dmitri, Chekroun, Mickaël D, Ghil, Michael

Journal:

Dynamics and Statistics of the Climate System

Année:

2018

Langue:

english

Fichier:

PDF, 3.20 MB

english, 2018

8

Detecting Cooking State of Grilled Chicken by Electronic Nose and Computer Vision Techniques

Fedorov, Fedor S., Yaqin, Ainul, Krasnikov, Dmitry V., Kondrashov, Vladislav A., Ovchinnikov, George, Kostyukevich, Yury, Osipenko, Sergey, Nasibulin, Albert G.

Journal:

Année:

2020

Fichier:

PDF, 1.65 MB

2020

9

Structure and dynamics of γ-SNAP: Insight into flexibility of proteins from the SNAP family

Eduard Bitto, Craig A. Bingman, Dmitry A. Kondrashov, Jason G. McCoy, Ryan M. Bannen, Gary E. Wesenberg, George N. Phillips Jr.

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 603 KB

english, 2008

10

Sampling of the native conformational ensemble of myoglobin via structures in different crystalline environments

Dmitry A. Kondrashov, Wei Zhang, Roman Aranda IV, Boguslaw Stec, George N. Phillips Jr.

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 434 KB

english, 2008

11

Molecular Mastication Mechanics

Dmitry A. Kondrashov, George N. Phillips Jr.

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 37 KB

english, 2005

12

Protein Structural Variation in Computational Models and Crystallographic Data

Dmitry A. Kondrashov, Adam W. Van Wynsberghe, Ryan M. Bannen, Qiang Cui, George N. Phillips Jr.

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 841 KB

english, 2007

13

Protein Structural Variation in Computational Models and Crystallographic Data

Dmitry A. Kondrashov, Adam W. Van Wynsberghe, Ryan M. Bannen, Qiang Cui, George N. Phillips Jr.

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 39 KB

english, 2007

14

Ensemble Refinement of Protein Crystal Structures: Validation and Application

Elena J. Levin, Dmitry A. Kondrashov, Gary E. Wesenberg, George N. Phillips Jr.

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 1.13 MB

english, 2007

15

Structure and Dynamics of UDP–Glucose Pyrophosphorylase from Arabidopsis thaliana with Bound UDP–Glucose and UTP

Jason G. McCoy, Eduard Bitto, Craig A. Bingman, Gary E. Wesenberg, Ryan M. Bannen, Dmitry A. Kondrashov, George N. Phillips Jr

Journal:

Journal of Molecular Biology

Année:

2007

Langue:

english

Fichier:

PDF, 1.89 MB

english, 2007

16

I-129 and I-131 ground deposition densities are correlated in Belorussian settlements contaminated following the Chernobyl accident

Masaharu Hoshi, Valery F Stepanenko, Yuri I Gavrilin, Yuri M Volkov, Irina K Makarenkova, Jun Takada, Valery E Shevchuk, Valery G Skvortsov, Dmitry V Petin, Elena K Iaskova, Alexey E Kondrashov, Alexa

Journal:

International Congress Series

Année:

2002

Langue:

english

Fichier:

PDF, 67 KB

english, 2002

17

Re-evaluation of thyroid doses in Russia after the Chernobyl accident

Valery F Stepanenko, Yuri I Gavrilin, Valery T Khrouch, Sergey M Shinkarev, Masaharu Hoshi, Elena K Iaskova, Alexey E Kondrashov, Dmitry V Petin, Lev I Moskovko, Jun Takada, Valery G Skvortsov, Mark Y

Journal:

International Congress Series

Année:

2002

Langue:

english

Fichier:

PDF, 70 KB

english, 2002

18

Reanalyses of the radiation belt electron phase space density using nearly equatorial CRRES and polar-orbiting Akebono satellite observations

Ni, Binbin, Shprits, Yuri, Nagai, Tsugunobu, Thorne, Richard, Chen, Yue, Kondrashov, Dmitri, Kim, Hee-jeong

Journal:

Journal of Geophysical Research

Année:

2009

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2009

19

Reanalysis of relativistic radiation belt electron fluxes using CRRES satellite data, a radial diffusion model, and a Kalman filter

Shprits, Yuri, Kondrashov, Dmitri, Chen, Yue, Thorne, Richard, Ghil, Michael, Friedel, Reiner, Reeves, Geoff

Journal:

Journal of Geophysical Research

Année:

2007

Langue:

english

Fichier:

PDF, 418 KB

english, 2007

20

Optimization and Evaluation of a Coarse-Grained Model of Protein Motion Using X-Ray Crystal Data

Kondrashov, Dmitry A., Cui, Qiang, Phillips, George N.

Journal:

Biophysical Journal

Année:

2006

Langue:

english

Fichier:

PDF, 309 KB

english, 2006

21

Application of a new data operator-splitting data assimilation technique to the 3-D VERB diffusion code and CRRES measurements

Shprits, Yuri, Kellerman, Adam, Kondrashov, Dmitri, Subbotin, Dmitriy

Journal:

Geophysical Research Letters

Année:

2013

Langue:

english

Fichier:

PDF, 733 KB

english, 2013

22

Transition Pathway Calculation Using Interpolated Parameters From Swarms Of Trajectories

Kondrashov, Dmitry A., Pan, Albert C., Roux, Benoit

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 132 KB

english, 2009

23

Nonequilibrium Dynamics Simulations of Nitric Oxide Release: Comparative Study of Nitrophorin and Myoglobin

Kondrashov, Dmitry A., Montfort, William R.

Journal:

Journal of Physical Chemistry B

Année:

2007

Langue:

english

Fichier:

PDF, 604 KB

english, 2007

24

Protein Functional Cycle Viewed at Atomic Resolution: Conformational Change and Mobility in Nitrophorin 4 as a Function of pH and NO Binding †,‡

Kondrashov, Dmitry A., Roberts, Sue A., Weichsel, Andrzej, Montfort, William R.

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 780 KB

english, 2004

25

Topological features of rugged fitness landscapes in sequence space

Kondrashov, Dmitry A., Kondrashov, Fyodor A.

Journal:

Trends in Genetics

Année:

2015

Langue:

english

Fichier:

PDF, 533 KB

english, 2015

26

Rough parameter dependence in climate models and the role of Ruelle-Pollicott resonances

Chekroun, Mickaël David, Neelin, J. David, Kondrashov, Dmitri, McWilliams, James C., Ghil, Michael

Journal:

Proceedings of the National Academy of Sciences

Année:

2014

Langue:

english

Fichier:

PDF, 1.15 MB

english, 2014

27

A structural perspective of compensatory evolution

Ivankov, Dmitry N, Finkelstein, Alexei V, Kondrashov, Fyodor A

Journal:

Current Opinion in Structural Biology

Année:

2014

Langue:

english

Fichier:

PDF, 403 KB

english, 2014

28

Predicting Critical Transitions in ENSO models. Part II: Spatially Dependent Models

Mukhin, Dmitry, Kondrashov, Dmitri, Loskutov, Evgeny, Gavrilov, Andrey, Feigin, Alexander, Ghil, Michael

Journal:

Journal of Climate

Année:

2015

Langue:

english

Fichier:

PDF, 3.03 MB

english, 2015

29

Data Assimilation for a Coupled Ocean–Atmosphere Model. Part II: Parameter Estimation

Kondrashov, Dmitri, Sun, Chaojiao, Ghil, Michael

Journal:

Monthly Weather Review

Année:

2008

Langue:

english

Fichier:

PDF, 1.92 MB

english, 2008

30

Diversity, Nonlinearity, Seasonality, and Memory Effect in ENSO Simulation and Prediction Using Empirical Model Reduction

Chen, Chen, Cane, Mark A., Henderson, Naomi, Lee, Dong Eun, Chapman, David, Kondrashov, Dmitri, Chekroun, Mickaël D.

Journal:

Journal of Climate

Année:

2016

Langue:

english

Fichier:

PDF, 3.13 MB

english, 2016

31

Comment on “Nonparametric forecasting of low-dimensional dynamical systems ”

Kondrashov, Dmitri, Chekroun, Mickaël D., Ghil, Michael

Journal:

Physical Review E

Année:

2016

Langue:

english

Fichier:

PDF, 121 KB

english, 2016

32

Publisher's Note: Comment on “Nonparametric forecasting of low-dimensional dynamical systems” [Phys. Rev. E 93 , 036201 (2016)]

Kondrashov, Dmitri, Chekroun, Mickaël D., Ghil, Michael

Journal:

Physical Review E

Année:

2016

Fichier:

PDF, 32 KB

2016

33

Interannual Variability in the North Atlantic Ocean’s Temperature Field and Its Association with the Wind Stress Forcing

Groth, Andreas, Feliks, Yizhak, Kondrashov, Dmitri, Ghil, Michael

Journal:

Journal of Climate

Année:

2017

Langue:

english

Fichier:

PDF, 5.64 MB

english, 2017

34

Multiscale Stuart-Landau Emulators: Application to Wind-Driven Ocean Gyres

Kondrashov, Dmitri, Chekroun, Mickaël, Berloff, Pavel

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 13.02 MB

english, 2018

35

Inverse stochastic–dynamic models for high-resolution Greenland ice core records

Boers, Niklas, Chekroun, Mickael D., Liu, Honghu, Kondrashov, Dmitri, Rousseau, Denis-Didier, Svensson, Anders, Bigler, Matthias, Ghil, Michael

Journal:

Earth System Dynamics

Année:

2017

Langue:

english

Fichier:

PDF, 3.56 MB

english, 2017

36

Inverse stochastic-dynamic models for high-resolution Greenland ice-core records

Boers, Niklas, Chekroun, Mickael D., Liu, Honghu, Kondrashov, Dmitri, Rousseau, Denis-Didier, Svensson, Anders, Bigler, Matthias, Ghil, Michael

Journal:

Earth System Dynamics Discussions

Année:

2017

Fichier:

PDF, 2.11 MB

2017

37

[IEEE 2019 International Multi-Conference on Engineering, Computer and Information Sciences (SIBIRCON) - Novosibirsk, Russia (2019.10.21-2019.10.27)] 2019 International Multi-Conference on Engineering, Computer and Information Sciences (SIBIRCON) - Hardware and Software Complex for the System of Human Gait Parameters Registration

Evgeni, Mishchenko, Pavel, Sirenko, Danila, Kondrashov, Dmitri, Pokamestov

Année:

2019

Fichier:

PDF, 476 KB

2019

38

Development of a cluster analysis method for solving the problem of identifying static voltage load characteristics

Kondrashov, Mikhail A, Popov, Maksim G, Bukharov, Dmitry S, Petrushin, Denis E

Journal:

Journal of Physics Conference Series

Année:

2020

Fichier:

PDF, 1.76 MB

2020

39

Carrier-induced optical bistability in the silicon micro-ring resonators under continuous wave pumping

Nikitin, Andrey A., Kondrashov, Alexandr V., Vitko, Vitalii V., Ryabcev, Ilya A., Zaretskaya, Galina A., Cheplagin, Nikolay A., Konkin, Dmitry A., Kokolov, Andrey A., Babak, Leonid I., Ustinov, Alexey

Journal:

Optics Communications

Année:

2021

Fichier:

PDF, 568 KB

2021